Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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GCT Seminoma Korkola Cluster Number 95 (135 genes) This page contains all miRNA mediated regulation and functional enrichment for GCT Seminoma Korkola cluster number 95. Information about seminoma can be found on Wikipedia, and further information about the "GCT Seminoma Korkola" dataset can be found in Korkola et al., 2006. Inferred miRNA Mediated Regulation Weeder-miRvestigator PITA TargetScan zzz999 hsa-mir-1283 hsa-mir-548c-3p Gene Ontology Enrichment GO ID GO Term Annotated Genes in Cluster GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 61 GO:0006350 transcription, DNA-dependent 43 GO:0006396 RNA processing 15 GO:0009058 biosynthetic process 56 GO:0009059 macromolecule biosynthetic process 50 GO:0010467 gene expression 59 GO:0010468 regulation of gene expression 44 GO:0010556 regulation of macromolecule biosynthetic process 41 GO:0016070 RNA metabolic process 44 GO:0019222 regulation of metabolic process 53 GO:0034645 cellular macromolecule biosynthetic process 50 GO:0043170 macromolecule metabolic process 74 GO:0044238 primary metabolic process 83 GO:0044249 cellular biosynthetic process 56 GO:0044260 cellular macromolecule metabolic process 71 GO:0060255 regulation of macromolecule metabolic process 49 Overlap Between miRNA Target Genes and Enriched Gene Ontology Annotations miRNA Method GO ID GO Term Overlap GO Annotated Genes Cluster Size miRNA Targets Genes P-Value hsa-mir-548c-3p TargetScan GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 40 61 135 91 0.5909397 hsa-mir-1283 PITA GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 14 61 135 24 0.04926589 hsa-mir-548c-3p TargetScan GO:0006350 transcription, DNA-dependent 26 43 135 91 0.8364218 hsa-mir-1283 PITA GO:0006350 transcription, DNA-dependent 8 43 135 24 0.3341999 hsa-mir-548c-3p TargetScan GO:0006396 RNA processing 13 15 135 91 0.01706451 hsa-mir-1283 PITA GO:0006396 RNA processing 5 15 135 24 0.02799873 hsa-mir-548c-3p TargetScan GO:0009058 biosynthetic process 33 56 135 91 0.942956 hsa-mir-1283 PITA GO:0009058 biosynthetic process 12 56 135 24 0.1228911 hsa-mir-548c-3p TargetScan GO:0009059 macromolecule biosynthetic process 29 50 135 91 0.9443477 hsa-mir-1283 PITA GO:0009059 macromolecule biosynthetic process 11 50 135 24 0.112612 hsa-mir-548c-3p TargetScan GO:0010467 gene expression 39 59 135 91 0.5408986 hsa-mir-1283 PITA GO:0010467 gene expression 15 59 135 24 0.01157365 hsa-mir-548c-3p TargetScan GO:0010468 regulation of gene expression 29 44 135 91 0.5280254 hsa-mir-1283 PITA GO:0010468 regulation of gene expression 12 44 135 24 0.01389459 hsa-mir-548c-3p TargetScan GO:0010556 regulation of macromolecule biosynthetic process 26 41 135 91 0.6775395 hsa-mir-1283 PITA GO:0010556 regulation of macromolecule biosynthetic process 10 41 135 24 0.06059548 hsa-mir-548c-3p TargetScan GO:0016070 RNA metabolic process 29 44 135 91 0.5280254 hsa-mir-1283 PITA GO:0016070 RNA metabolic process 10 44 135 24 0.1007281 hsa-mir-548c-3p TargetScan GO:0019222 regulation of metabolic process 37 53 135 91 0.2533566 hsa-mir-1283 PITA GO:0019222 regulation of metabolic process 12 53 135 24 0.07901079 hsa-mir-548c-3p TargetScan GO:0034645 cellular macromolecule biosynthetic process 29 50 135 91 0.9443477 hsa-mir-1283 PITA GO:0034645 cellular macromolecule biosynthetic process 11 50 135 24 0.112612 hsa-mir-548c-3p TargetScan GO:0043170 macromolecule metabolic process 49 74 135 91 0.5550994 hsa-mir-1283 PITA GO:0043170 macromolecule metabolic process 16 74 135 24 0.06378636 hsa-mir-548c-3p TargetScan GO:0044238 primary metabolic process 55 83 135 91 0.5651119 hsa-mir-1283 PITA GO:0044238 primary metabolic process 18 83 135 24 0.03863044 hsa-mir-548c-3p TargetScan GO:0044249 cellular biosynthetic process 33 56 135 91 0.942956 hsa-mir-1283 PITA GO:0044249 cellular biosynthetic process 12 56 135 24 0.1228911 hsa-mir-548c-3p TargetScan GO:0044260 cellular macromolecule metabolic process 47 71 135 91 0.5520636 hsa-mir-1283 PITA GO:0044260 cellular macromolecule metabolic process 16 71 135 24 0.03900436 hsa-mir-548c-3p TargetScan GO:0060255 regulation of macromolecule metabolic process 34 49 135 91 0.2888573 hsa-mir-1283 PITA GO:0060255 regulation of macromolecule metabolic process 12 49 135 24 0.03967359

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